Volume 15 Supplement 1
Proceedings of the ACM Eighth International Workshop on Data and Text Mining in Biomedical Informatics
Research
Edited by Doheon Lee, Hua Xu, Min Song and Luonan Chen
Publication of this supplement has not been supported by sponsorship. Information about the source of funding for publication charges can be found in the individual articles. Articles have undergone the journal's standard peer review process for supplements. The Supplement Editors declare that they have no competing interests.
ACM Eighth International Workshop on Data and Text Mining in Biomedical Informatics. Go to
conference site.
Shanghai, China7 November 2014
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Content type: Research article
Alzheimer's disease (AD) is a neurodegenerative and progressive disorder that results in brain malfunctions. Resting-state (RS) functional magnetic resonance imaging (fMRI) techniques have been successfully ap...
Authors: Jongan Lee, Younghoon Kim, Yong Jeong, Duk L Na, Jong-Won Kim, Kwang H Lee and Doheon Lee
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Content type: Research article
Parsing, which generates a syntactic structure of a sentence (a parse tree), is a critical component of natural language processing (NLP) research in any domain including medicine. Although parsers developed i...
Authors: Min Jiang, Yang Huang, Jung-wei Fan, Buzhou Tang, Josh Denny and Hua Xu
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Content type: Research article
Interactions between biological entities such as genes, proteins and metabolites, so called pathways, are key features to understand molecular mechanisms of life. As pathway information is being accumulated ra...
Authors: Seyeol Yoon, Jinmyung Jung, Hasun Yu, Mijin Kwon, Sungji Choo, Kyunghyun Park, Dongjin Jang, Sangwoo Kim and Doheon Lee
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Content type: Research article
The Entity Linking (EL) task links entity mentions from an unstructured document to entities in a knowledge base. Although this problem is well-studied in news and social media, this problem has not received m...
Authors: Jin G Zheng, Daniel Howsmon, Boliang Zhang, Juergen Hahn, Deborah McGuinness, James Hendler and Heng Ji
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Content type: Research article
Narrative text is a useful way of identifying injury circumstances from the routine emergency department data collections. Automatically classifying narratives based on machine learning techniques is a promisi...
Authors: Lin Chen, Kirsten Vallmuur and Richi Nayak
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Content type: Research article
Alterations of a genome can lead to changes in protein functions. Through these genetic mutations, a protein can lose its native function (loss-of-function, LoF), or it can confer a new function (gain-of-funct...
Authors: Seunghwan Jung, Sejoon Lee, Sangwoo Kim and Hojung Nam
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Content type: Research article
It has been reported that several brain diseases can be treated as transnosological manner implicating possible common molecular basis under those diseases. However, molecular level commonality among those bra...
Authors: Kihoon Cha, Taeho Hwang, Kimin Oh and Gwan-Su Yi
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Content type: Research article
Electronic Health Records (EHRs) are frequently used by clinicians and researchers to search for, extract, and analyze groups of patients by defining Health Outcome of Interests (HOI). The definition of an HOI...
Authors: Olivier C Curé, Henri Maurer, Nigam H Shah and Paea Le Pendu
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Content type: Research article
Bio-entity extraction is a pivotal component for information extraction from biomedical literature. The dictionary-based bio-entity extraction is the first generation of Named Entity Recognition (NER) techniques.
Authors: Min Song, Hwanjo Yu and Wook-Shin Han
