Fig. 6
From: Natural language processing to identify lupus nephritis phenotype in electronic health records
SHAP plot for MetaMap mixed model with SHAP feature importance measured as the mean absolute Shapley values. The Features are ordered according to their importance. The SHAP bar plot shows global importance of each feature which is taken to be the mean absolute SHAP value for that feature over all the given samples. The most important feature in this plot is renal_C002413 which has a global importance of 0.916 compared to an average feature global importance of 0.192. RENAL: renal indictor from structured data; renal_C4054543: membranous lupus nephritis; renal_C0268758: SLE glomerulonephritis syndrome, WHO class V; renal_C4053955: Systemic Lupus Erythematosus Nephritis Class IV; renal_C4053959: Systemic Lupus Erythematosus Nephritis Class III