Fig. 2
From: Towards a clinically-based common coordinate framework for the human gut cell atlas: the gut models
Edinburgh-Cambridge Helmsley Trust project HGCA CCF use-case. The project design includes pre-surgery MRI imaging followed by Crohn’s lesion resection. The resected material is processed to produce histological sections for staining and imaging matched to adjacent tissues used for single-cell transcriptomics. The transcriptome data is archived at and accessible from the Single Cell Expression Atlas and the radiological and histology image data is submitted to the HCA archive