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Table 6 Detailed variables were used as inputs to the proposed model

From: A process mining- deep learning approach to predict survival in a cohort of hospitalized COVID‐19 patients

Variables related to specific category

Variables

Variables values (if applicable)

Demographics

Age

 

Demographics

Gender

 

Demographics

Race

 

Process mining

EventCount

 

Process mining

TokenCount

 

Process mining

Marking

 

Process mining

LinearDecay

 

Process mining

LinearDecay_mean

 

Process mining

ExpDecay_max

 

Process mining

LogDecay_mean

 

Comorbidities

Hypertension

 

Comorbidities

Diabetes

 

Comorbidities

Heart Disease

 

Comorbidities

COPD

 

Comorbidities

Stroke

 

Comorbidities

Cerebrovascular Disease

 

Comorbidities

Cancer

 

Comorbidities

Respiratory Problems

 

Comorbidities

Chronic Kidney Disease

 

Comorbidities

Tuberculosis

 

Location

COVID-4

 

Location

COVID-2

 

Location

MEDICAL INTENSIVE

 

Location

FAMILYMEDICINE

 

Location

MICU-2

 

Location

MED SERVICE A

 

Location

MED SERVICE D

 

Location

MED SERVICE C

 

Location

MED SERVICE B

 

Location

MiCU-1

 

Location

MED SERVICE E

 

Location

COVID-5

 

Location

COVID MICU-3

 

Location

MED HEMATOLOGY

 

Location

MED HEPATOLOGY/LIVER

 

Location

MED SICKLE CELL

 

Location

COVID MICU-5

 

Location

ORGAN TRANSPLANT

 

Location

MED ONCOLOGY

 

Location

COVID MICU-4

 

Location

STEM CELL TRANSPLANT

 

Location

PED PREADMIT ONLY

 

Location

COVID-6

 

Location

SURGERY GENERAL

 

Location

NEUROSURGERY

 

Location

MED CARDIO

 

Location

CORONARY CARE UNIT

 

Location

NEUROLOGY

 

Location

MED PREAD ONLY

 

Location

MED GI

 

Encounters

Inpatient

 

Encounters

UIH ER

 

Encounters

death

 

Encounters

PREADMIT

 

Encounters

ER OB

 

Encounters

5 W PEDS

 

Encounters

disch

 

Procedure reports

RADRPT

 

Procedure reports

ECG Measurements and Interpretation

 

Procedure reports

Echo Transthoracic

 

Procedure reports

Pathology Report

 

Procedure reports

Echo Transesophageal

 

Lab

(1,3)-BETA-D-GLUCAN

Normal

Lab

(1,3)-BETA-D-GLUCAN INTERPRETATION

Normal

Lab

% BASOPHIL

Normal

Lab

% EOSINOPHIL

Normal

Lab

% LYMPHOCYTE

Normal

Lab

% MONOCYTE

Normal

Lab

% NEUTROPHIL

Normal

Lab

% TRANSFERRIN SAT

Normal, LOW, HI

Lab

A. GALACTOMANNAN AG

Normal

Lab

A. GALACTOMANNAN INDEX

Normal

Lab

A1ANTITRYP

Normal

Lab

ABO/RH(D)

No flag

Lab

ABS CD19

Normal, LOW

Lab

ABS CD3

Normal, LOW

Lab

ABS CD3/CD4

LOW

Lab

ABS CD3/CD8

Normal,LOW

Lab

ABS CD56

Normal,LOW,HI

Lab

Abs Retic

Normal,HI

Lab

ABSOLUTE BAND NEUTROPHIL (MANUAL DIFF)

Normal

Lab

ABSOLUTE BASOPHIL (MANUAL DIFF)

HI

Lab

ABSOLUTE EOSINOPHIL (MANUAL DIFF)

Normal, HI

Lab

ABSOLUTE LYMPHOCYTE (MANUAL DIFF)

Normal, LOW, HI

Lab

ABSOLUTE MONOCYTE (MANUAL DIFF)

Normal, LOW, HI

Lab

ABSOLUTE NEUTROPHILS (MANUAL DIFF)

Normal, HI

Lab

ACETAMINOPHEN

LOW

Lab

ACT BICARB

Normal, LOW, HI

Lab

ADAMTS13

LOW

Lab

ADDITIONAL TESTING

Normal

Lab

ADENOVIRUS

Normal

Lab

ADENOVIRUS QUANT BY PCR

Normal

Lab

AEROMONAS/PLEISOMONAS SCREEN

Normal

Lab

ALB CONC

Normal

Lab

ALBUMIN

Normal, LOW

Lab

Alcohol, Urn Screen

Normal

Lab

ALK PHOS

Normal, LOW, HI

Lab

ALT(SGPT)

Normal, LOW, HI

Lab

amd

LOW

Lab

AMMONIA

HI

Lab

AMORPHOUS

Normal

Lab

AMPHETAMINES-UR

Normal

Lab

Amphetamines, Urn Screen

Normal

Lab

AMYLASE

HI

Lab

ANION GAP

Normal, HI

Lab

ANISOCYTOSIS

Normal

Lab

ANTI NUCLEAR AB

Normal

Lab

ANTI-HB CORE IGM

Normal

Lab

ANTI-MITOCHONDRIAL IGG

Normal

Lab

ANTI-SMOOTHMUSCLE

Normal

Lab

ANTIBODY SCREEN

No flag

Lab

ASPERGILLUS AB BY ID

Normal

Lab

AST(SGOT)

Normal, LOW, HI

Lab

ATYPICAL BACTERIAL PNEUMONIA

Normal

Lab

B-NATRIURETIC PEPTIDE

Normal, HI

Lab

BAND NEUTROPHIL

Normal

Lab

BARBITURATES-UR

Normal

Lab

Barbiturates, Urn Screen

Normal

Lab

BASE EXCESS

Normal

Lab

BASO

Normal

Lab

BASOPHILS

Normal, HI

Lab

Benzodiazepines, Urn Screen

Normal

Lab

BENZODIAZPINE-UR

Normal

Lab

BETAHYDROXYBUTYRIC ACID

Normal, HI

Lab

BF ALBUMIN

Normal

Lab

BF BILIRUBIN

Normal

Lab

BF GLUCOSE

Normal

Lab

BF LDH

Normal

Lab

BF LYMPH

Normal

Lab

BF MACROS/MONOS

Normal

Lab

BF MESO

Normal

Lab

BF NEUT

Normal

Lab

BF TOTAL PROTEIN

Normal

Lab

BF-RBC

Normal, HI

Lab

BF-WBC

Normal

Lab

BILIRUBIN, DIRECT

Normal, HI

Lab

BILIRUBIN,TOTAL

Normal, HI

Lab

BKV QUANT BY PCR

Normal

Lab

BKV RT SPECIMEN

Normal

Lab

Blastomyces AB

Normal

Lab

BLASTOMYCES INTERPRETATION

Normal

Lab

BLASTOMYCES RESULT

Normal

Lab

BLASTOMYCES SPECIMEN

Normal

Lab

Bordetella parapertussis

Normal

Lab

BORDETELLA PERTUSSIS

Normal

Lab

BRPR

ABN

Lab

BUDDING YEAST

Normal

Lab

BUN

Normal, LOW, HI

Lab

BUN/CREAT RATIO

Normal, LOW, HI

Lab

BURR CELLS

Normal

Lab

C DIFFICILE RT PCR

Normal

Lab

C-REACTIVE PROTEIN

Normal, HI

Lab

CALCIUM

Normal, LOW, HI

Lab

CALPROTECTIN, FECAL

HI

Lab

CAMPYLOBACTER GROUP BY PCR

Normal

Lab

CARBMAZPNE, UNBOUND

Normal

Lab

CD19%, TOTAL B CELLS

Normal, HI

Lab

CD3/CD4%, HELPER T

Normal, LOW

Lab

CD3/CD8%, SUP T CELLS

Normal, HI

Lab

CD3%, TOTAL T CELLS

Normal, LOW

Lab

CD4 COMMENT

Normal

Lab

CD56%

Normal, HI

Lab

CDASU 9A Comments

Normal

Lab

CEA

HI

Lab

CERULOPLASMIN

LOW

Lab

CHK

No flag

Lab

CHLAMYDIA PNEUMONIAE

Normal

Lab

CHLORIDE

Normal, LOW, HI

Lab

CHOLESTEROL

Normal, HI

Lab

CK MACRO TYPE I

Normal

Lab

CK MACRO TYPE II

Normal

Lab

CK TOTAL

Normal

Lab

CK-BB

Normal

Lab

CK-MB

Normal

Lab

CK-MM

Normal

Lab

CLARITY

Normal

Lab

CLUMPED PLATELETS

Normal

Lab

CMV QUANT BY PCR

Normal

Lab

CO2 CONTENT

Normal, LOW, HI

Lab

COCAINE-URINE

Normal

Lab

Cocaine, Urn Screen

Normal

Lab

COLOR

Normal

Lab

COMPLEMENT C3

LOW

Lab

COMPLEMENT C4

Normal

Lab

COPPER

HI

Lab

Coronavirus 19

Normal, ABN

Lab

CORONAVIRUS 229E

Normal

Lab

CORONAVIRUS HKU1

Normal

Lab

CORONAVIRUS NL63

Normal

Lab

CORONAVIRUS OC43

Normal

Lab

CPK

Normal, LOW, HI

Lab

CREAT CONC

Normal

Lab

CREATININE

Normal, LOW, HI

Lab

Creatinine, Urn Screen

Normal

Lab

CROSSMATCH

No flag

Lab

CYTOPLASMIC STAINING

Normal

Lab

D-DIMER

Normal, HI, CRIT

Lab

DIFF METHOD

Normal

Lab

DIFFERENTIAL METHOD

Normal

Lab

DOHLE BODIES

Normal

Lab

EBV QUANT BY PCR

Normal, ABN

Lab

EOS

Normal, HI

Lab

EOSINOPHIL

Normal, HI

Lab

Estimated Creat Clearance

No flag, LOW

Lab

Estimated GFR

No flag

Lab

ETHANOL

Normal

Lab

FENTANYL QUANT URINE

Normal

Lab

FERRITIN

Normal, LOW, HI

Lab

FIBRINOGEN

Normal, HI

Lab

FINE GRAN CAST

HI

Lab

FK506/TACROLIMUS

Normal

Lab

Flu A (POCT)

Normal

Lab

FLU A H1 SEASONAL

Normal

Lab

FLU A H1N1 2009

Normal, ABN

Lab

FLU B

Normal

Lab

Flu B (POCT)

Normal

Lab

FOLATE

Normal

Lab

FREE T4

Normal, LOW

Lab

GLUCOSE

Normal, LOW, HI, CRIT

Lab

GLUCOSE (POCT)

Normal, LOW, HI, CRIT

Lab

HAPTOGLOBIN

Normal, HI

Lab

HCT

Normal, LOW, HI

Lab

HCV REAL TIME PCR

Normal

Lab

HDL

Normal, LOW

Lab

HELP/SUPP RATIO

Normal

Lab

Hemoglobin—POCT

LOW

Lab

HEMOGLOBIN A2

Normal

Lab

HEMOGLOBIN F

Normal, HI

Lab

HEP A IGM AB

Normal

Lab

HEP B CORE AB,TOTAL

Normal

Lab

HEP B SURF AB,QUANT

Normal

Lab

HEP B SURFACE AG

Normal

Lab

HEP C ANTIBODY

Normal, ABN

Lab

HGB

Normal, LOW, HI

Lab

HGB A

Normal

Lab

HGB A1C

Normal, HI

Lab

HGB C

Normal

Lab

HGB S

Normal

Lab

HISTOPLASMA INTERPRETATION

Normal

Lab

HISTOPLASMA RESULT

Normal

Lab

HISTOPLASMA SPECIMEN

Normal

Lab

HIV 1 Antibody

Normal

Lab

HIV 1 Antigen

Normal

Lab

HIV 2 Antibody

Normal

Lab

HIV Antigen and Antibody Screen NC

Normal

Lab

HIV1AB

Normal

Lab

HIV1AG

Normal

Lab

HIV2AB

Normal

Lab

HOWELL JOLLY

Normal

Lab

HSV TYPE I

Normal

Lab

HSV TYPE II

Normal

Lab

HUMAN METAPNEUMOVIRUS

Normal

Lab

HUMAN RHINOVIRUS/ENTEROVIRUS

Normal

Lab

HVABAG

Normal

Lab

HYALINE CAST

Normal

Lab

HYPOCHROMASIA

Normal

Lab

IGA

Normal, LOW, HI

Lab

IGG

Normal, LOW

Lab

IGM

Normal, LOW, HI

Lab

IMMUNOFIX SERUM

Normal

Lab

Influenza A Equivocal (Inconclusive)

Normal

Lab

INFLUENZA A, H3 SUBTYPE

Normal

Lab

Influenza A, No Subtype Detected

Normal

Lab

INR

Normal, HI, CRIT

Lab

INTERLEUKIN 6

Normal, HI

Lab

INTERPRETATION

Normal

Lab

IONIZED CALCIUM

Normal, LOW

Lab

IRON

Normal, LOW, HI

Lab

Issue Date/Time

No flag

Lab

LACTIC ACID

Normal, LOW, HI, CRIT

Lab

LARGE PLATELETS

Normal

Lab

LDH

Normal, HI

Lab

LDL, CALCULATED

Normal, HI

Lab

LEGIONELLA AG, UR

Normal

Lab

LEUK ESTERASE

Normal, ABN

Lab

LEVETIRACETAM LEVEL

LOW

Lab

LIPASE

Normal, LOW, HI

Lab

LITHIUM

Normal

Lab

LYMPH

Normal, LOW, HI

Lab

LYMPHOCYTE

Normal, LOW, HI

Lab

MACROCYTOSIS

Normal

Lab

MAGNESIUM

Normal, LOW ,HI

Lab

MARIJUANA-URINE

Normal, ABN

Lab

Marijuana, Urn Screen (THC, Urn, Screen)

Normal

Lab

MCH

Normal, LOW, HI

Lab

MCHC

Normal, LOW

Lab

MCV

Normal, LOW, HI

Lab

MEAS O2 SAT-MV

Normal, LOW, HI

Lab

META

HI

Lab

Methadone, Urn Screen

Normal

Lab

METHANOL

Normal

Lab

MICROALB/CREAT RATIO

HI

Lab

MICROCYTOSIS

Normal

Lab

MITOGEN MINUS NIL

Normal

Lab

MONO

Normal, LOW, HI

Lab

MONOCYTE

Normal, LOW, HI

Lab

MPV

Normal, LOW, HI

Lab

MRSA Transcribed Result

No flag

Lab

MUCUS

Normal

Lab

MYELO

HI

Lab

NEUT

Normal, LOW, HI

Lab

NEUTROPHIL

Normal, LOW, HI

Lab

NIL (NEGATIVE CONTROL)

Normal

Lab

NITRITE

Normal, ABN

Lab

NON FENTANYL URINE

Normal

Lab

Non-HDL Chol

No flag

Lab

NOROVIRUS GI/GII BY PCR

Normal

Lab

NUCLEATED RBC'S

Normal

Lab

O2 SAT

Normal, LOW, HI

Lab

O2 SAT MEASURED

Normal, LOW

Lab

OPIATE HYDROCODONE

Normal

Lab

OPIATE ACETYL MORPHINE

Normal

Lab

OPIATE CODEINE

Normal

Lab

OPIATE HYDROMORPHONE

Normal

Lab

OPIATE MORPHINE

Normal

Lab

OPIATE OXYCODONE

Normal

Lab

OPIATE OXYMORPHONE

Normal

Lab

OPIATES NORHYDROCODONE

Normal

Lab

OPIATES NOROXYCODONE

Normal

Lab

OPIATES NOROXYMORPHONE

Normal

Lab

OPIATES-URINE

Normal, ABN

Lab

Opiates, Urn Screen

Normal

Lab

OVA AND PARASITES EXAM

Normal

Lab

OVALOCYTES

Normal

Lab

PARA1

Normal

Lab

PARA2

Normal

Lab

PARA3

Normal

Lab

PARA4

Normal

Lab

PARVOVIRUS QUANT BY PCR

Normal

Lab

PCO2

Normal, LOW, HI, CRIT

Lab

PCT FREE CARB

Normal

Lab

PERFORMING LAB

Normal

Lab

PH

Normal, LOW, HI

Lab

PHENCYCLIDINE UR

Normal

Lab

Phencyclidine, Urn Screen

Normal

Lab

PHENYTOIN FREE

Normal

Lab

PHENYTOIN TOTAL

Normal, LOW

Lab

PHOSPHORUS

Normal, LOW, HI, CRIT

Lab

PLT

Normal, LOW, HI, CRIT

Lab

PLT ESTIMATE

Normal

Lab

PO2

Normal, LOW, HI

Lab

POIKILOCYTOSIS

Normal

Lab

POLYCHROMASIA

Normal

Lab

POTASSIUM

Normal, LOW,HI, CRIT

Lab

PRO BNP,NT

Normal, HI

Lab

PROCALCITONIN

Normal

Lab

Product Code

No flag

Lab

Product Identification

No flag

Lab

PROLACTIN

Normal

Lab

Propoxyphene, Urn Screen

Normal

Lab

PROT/CREAT RATIO

Normal

Lab

PROTHROMBIN TIME

Normal, HI

Lab

PTH-INTACT

HI

Lab

PTT

Normal, LOW, HI, CRIT

Lab

QTBG INTERPRETATION

Normal

Lab

QUANTIFERON TB RESULT

Normal

Lab

RBC

Normal, LOW, HI

Lab

RDW

Normal, HI

Lab

REACTIVE LYMPHS

Normal

Lab

RESPIRATORY PCR PANEL SPECIMEN SOURCE

Normal

Lab

RESPIRATORY SYNCYTIAL VIRUS

Normal

Lab

RETIC COUNT

Normal, HI

Lab

ROTAVIRUS A BY PCR

Normal

Lab

SALICYLATE

Normal

Lab

SALMONELLA SPECIES BY PCR

Normal

Lab

SARS-CoV-2 IGG AB

Normal, ABN

Lab

SCHISTOCYTES

Normal

Lab

SED RATE-WEST

Normal, HI

Lab

SEND OUT RESULT:

Normal

Lab

SEND OUT TEST:

Normal

Lab

SERUM ALB ELECT

Normal

Lab

SERUM ALPHA 1

Normal

Lab

SERUM ALPHA 2

Normal

Lab

SERUM BETA

Normal

Lab

SERUM GAMMA

Normal

Lab

SERUM HCG

Normal

Lab

SERUM OSMOLALITY

Normal, LOW, HI, CRIT

Lab

SERUM TOTAL PROTEIN

Normal

Lab

SFIX ENHANCED REPORT

Normal

Lab

SHIGA TOXIN 1 BY PCR

Normal

Lab

SHIGA TOXIN 2 BY PCR

Normal

Lab

SHIGELLA SPECIES BY PCR

Normal

Lab

SICKLE CELLS

Normal

Lab

SODIUM

Normal, LOW, HI

Lab

SPECIMEN SOURCE

Normal

Lab

SPECIMEN TYPE

Normal

Lab

SPHEROCYTES

Normal

Lab

SQUAMOUS EPI'S

Normal, HI

Lab

Status Information

No flag

Lab

STREPTOCOCCUS PNEUMONIAE AG, URINE

Normal

Lab

SYPHILIS FOLLOW UP, RPR QUANT

Normal

Lab

TARGET CELLS

Normal

Lab

TB AG MINUS NIL

Normal

Lab

TB SCR COMMENT

Normal

Lab

TB2 AG MINUS NIL

Normal

Lab

TEARDROPS

Normal

Lab

TOTAL CARB

Normal

Lab

TOTAL IRON BINDING

Normal, LOW, HI

Lab

TOTAL PROTEIN

Normal, LOW, HI

Lab

Total Syphilis Antibody IGG and IGM

ABN

Lab

TOXIC VACUOLIZATION

Normal

Lab

TRANS EPI CELLS

Normal, HI

Lab

TRANSFERRIN

Normal, LOW

Lab

Treponema pallidum Antibody by TP-PA

Normal

Lab

TRIGLYCERIDE

Normal, HI

Lab

TROPONIN I

Normal, HI, CRIT

Lab

TSH

Normal, LOW, HI

Lab

Unit Blood Type

No flag

Lab

Unit Number

No flag

Lab

UR CHLORIDE-RANDOM

Normal

Lab

UR CREATININE

Normal

Lab

UR OSMOLALITY

Normal, LOW, HI

Lab

UR PH

Normal

Lab

UR POTASSIUM-RANDOM

Normal

Lab

UR SODIUM-RANDOM

Normal

Lab

UR TOTAL PROTEIN

Normal

Lab

UR UREA N-RANDOM

Normal

Lab

URIC ACID

Normal, LOW, HI

Lab

Urine bacteria

ABN

Lab

URINE BILIRUB

Normal

Lab

URINE BLOOD

Normal,ABN

Lab

URINE CLARITY

Normal

Lab

URINE COLOR

Normal

Lab

URINE GLUCOSE

Normal,ABN

Lab

URINE HCG

Normal

Lab

URINE KETONES

Normal,ABN

Lab

Urine pregnancy test—POCT

No flag

Lab

URINE PROTEIN

Normal,ABN

Lab

Urine RBC's

Normal,HI

Lab

URINE SP GRAV

Normal,HI

Lab

Urine WBC's

Normal,HI

Lab

UROBILINOGEN

Normal,HI

Lab

VANCOMYCIN-RANDOM

Normal

Lab

VIBRIO GROUP BY PCR

Normal

Lab

VITAMIN B1

Normal

Lab

VITAMIN B12

Normal,HI

Lab

VITAMIN D (25 OH)

LOW

Lab

Volume

No flag

Lab

WAXY CAST

Normal

Lab

WBC

Normal,LOW,HI

Lab

WBC CLUMPS

Normal

Lab

WHOLE BLOOD GLUC

Normal,HI,CRIT

Lab

WHOLE BLOOD HGB

Normal,LOW

Lab

WHOLE BLOOD K

Normal,LOW,HI,CRIT

Lab

WHOLE BLOOD NA

Normal,LOW,HI

Lab

YERSINIA ENTEROCOLITICA BY PCR

Normal

Lab

ZINC, BLOOD

Normal

Vit

BMI

ok

Vit

BP diastolic

ok

Vit

BP systolic

ok

Vit

Pulse rate

ok

Vit

Respiratory rate

ok

Vit

SPO2

ok,crit

Vit

Temp (DegC)

ok,crit