From: Evaluating semantic similarity methods for comparison of text-derived phenotype profiles
By | Method | AUC | MRR-0 | A@10 |
---|---|---|---|---|
AUC | AVG (GW) + Resnik (PW) + Resnik (IC) | 0.81 (0.79–0.83) | 0.19 | 0.34 (0.31–0.37) |
AVG (GW) + Jaccard (PW) + Zhou (IC) | 0.8 (0.78–0.82) | 0.19 | 0.32 (0.29–0.35) | |
AVG (GW) + NODE_SIM (PW) + Zhou (IC) | 0.8 (0.78–0.82) | 0.18 | 0.31 (0.28–0.34) | |
MRR | GIC (DGW) + Zhou (IC) | 0.68 (0.65–0.71) | 0.24 | 0.41 (0.38–0.44) |
GIC (DGW) + Seco (IC) | 0.68 (0.65–0.71) | 0.24 | 0.41 (0.38–0.44) | |
Bader (DGW) | 0.77 (0.74–0.8) | 0.24 | 0.4 (0.37–0.43) | |
A@10 | GIC (DGW) + Resnik (IC) | 0.68 (0.65–0.71) | 0.24 | 0.42 (0.39–0.45) |
GIC (DGW) + Sanchez (IC) | 0.67 (0.64–0.7) | 0.24 | 0.42 (0.39–0.45) | |
GIC (DGW) + Min (IC) | 0.67 (0.64–0.7) | 0.23 | 0.42 (0.39–0.45) |