Table 2 The ten ontologies with the most unsatisfiable classes in the OBO ontologies, when combined with a repaired version of the merged OBO Foundry ontology
Ontology name | Unsatisfiable class count |
|---|---|
Unified Phenotype Ontology (UPHENO) [44] | 106,126 |
Monarch Disease Ontology (MONDO) [45] | 97,619 |
Ontology for MIRNA Target (OMIT) [46] | 63,015 |
Molecular Process Ontology (MOP) [47] | 57,355 |
Name Reaction Ontology (RXNO) [48] | 57,330 |
Human Phenotype Ontology (HP) [6] | 46,075 |
Mammalian Phenotype Ontology (MP) [7] | 43,806 |
Cell Ontology (CL) [49] | 34,685 |
Ontology of Biological Attributes (OBA) [50] | 26,523 |
Ontology of Adverse Events (OAE) [51] | 20,566 |