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Table 14 Gene–phenotype ranking by number of common-phenotype genes (PKDE4J)

From: Combining entity co-occurrence with specialized word embeddings to measure entity relation in Alzheimer’s disease

Entity AEntity C (Gene Only)PhenotypePhenotype-Related GeneCommon Phenotype Genes
Alzheimers diseaseCD36Platelet glycoprotein IV deficiencyCD3617
Macrothrombocytopenia
Coronary heart diseaseCD36
Malaria, cerebralACKR1, FCGR2A, FCGR2B, FCGR2A, FCGR2B, CR1, GYPC, CISH, GYPB, GYPA, TNF, HBB, TIRAP, NOS2A, SLC4A1, ICAM1,G6PD, CD36
Alzheimers diseaseIL10Graft-versus-host diseaseIL1013
HIV-1CXCR1, CX3CR1, TLR3, HLAC, CXCL12, IFNG, IL4R, CCL3L1, CCL2, CCL11, CCL3, CD209, KIR3DL1, IL10
Rheumatoid arthritis
Alzheimers diseaseABCA1HDL deficiencyAPOA1, ABCA12
Tangier diseaseABCA1
Coronary artery disease, familialLDLR, ABCA1