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Table 3 Graph characterization for bipartite graphs generated from the HPO-Orphanet, EMR, and HPO-Orphanet+ (based on 97 shared diseases)

From: Rare disease knowledge enrichment through a data-driven approach

  HPO-Orphanet Graph EMR Graph HPO-Orphanet+ Graph
# of Disease Nodes 97 97 97
# of Phenotype Nodes 722 670 1194
# of Edges 1973 2071 3914
Density 0.006 0.007 0.005
Average Degree 4.818 5.4 6.064