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Table 3 Graph characterization for bipartite graphs generated from the HPO-Orphanet, EMR, and HPO-Orphanet+ (based on 97 shared diseases)

From: Rare disease knowledge enrichment through a data-driven approach

 

HPO-Orphanet Graph

EMR Graph

HPO-Orphanet+ Graph

# of Disease Nodes

97

97

97

# of Phenotype Nodes

722

670

1194

# of Edges

1973

2071

3914

Density

0.006

0.007

0.005

Average Degree

4.818

5.4

6.064