Skip to main content

Advertisement

Table 2 Performance comparison

From: Automatic extraction of protein-protein interactions using grammatical relationship graph

Corpus HPRD50 IEPA LLL PICADb
  F P R F P R F P R F P R
Bui et al. [24] 71.7 62.2 84.7 73.4 62.9 88.1 83.6 81.9 85.4
Miwa et al. [49] 70.9 68.5 76.1 71.7 67.5 78.6 80.1 77.6 86.0
Chang et al. [48] 71.5 63.8 81.2 71.4 62.5 83.3 80.6 73.2 89.6
Murugesan et al. [73] 80.0 76.3 84.2 80.2 75.9 85.2 89.2 87.3 91.2
aZhao et al. [81] 71.3 58.7 92.4 74.2 67.0 84.0 82.0 75.8 91.8
GRGT 64.0 86.5 50.8 74.9 91.0 63.6 83.6 91.2 77.1 70.0 78.2 63.4
  1. Performance comparison of our method (GRGT) with top-performing methods on four benchmark datasets. F F1-score, P precision, R recall. The measurement is out of 100. adeep learning method. bValues are not available because of the unavailability of executable program or source code