Table 1 Observed allele counts for SNP, where O1,1 and O1,2 are the number of alleles A and a in the case group, O2,1 and O2,1 are the corresponding counts in the control group, N1 and N2 are the total allele counts for the case and control group, respectively.
From: FORESEE: Fully Outsourced secuRe gEnome Study basEd on homomorphic Encryption
SNP | A | a | Total |
|---|---|---|---|
Case | O 1,1 | O 1,2 | Nl = O1,1 + O1,2 |
Control | O 2,1 | O 2,2 | N2 = O2,1 + O2,2 |
Total | O1,1 + O2,1 | O1,2 + O2,2 | Nl + Nl2 |