From: Type 2 diabetes genetic association database manually curated for the study design and odds ratio
 | T2DGADB | T2D-DB1 | Hindorff et al.2 | Johnson et al.3 | T1Dbase4 |
---|---|---|---|---|---|
T2D Candidate genes | 530 | 330 | 50 | 476 | Â |
Unique genes | 421 | NS | 23 | 380 | Â |
T2D Candidate SNP Markers | 2108 | NS | 76 | 6076 | Â |
Unique Markers | 1874 | NS | 28 | 5841 | Â |
T2DM publication | 701 | 8963 | 23 | 12 | Â |
coverage year | 2000 ~ 2009. 10 | ~ 2009. 1 | 2005 ~ 2010. 10 | 2002. 12 ~ 2008. 2 | ~ 2010. 10 |
data coverage | T2D candidate gene approach, GWAS | T2D candidate gene approach, GWAS | GWAS (disease/trait) | GWAS (disease/trait) | T1D candidate gene approach, GWAS |
association data format | text, graph | NA | text | text | text |
feature | summary of T2D related genetic association study results(sample size, gene, SNP, MAF, p-value, OR, covariant, etc.) | summary of molecular factors using public databases (EST, Transcripts, Unigene, Homologene, GO, Pathways, Tissue Specific Expression, Protein-Protein interactor, Riskfactors, Complications) | summary of GWAS data (Disease, sample size, gene, SNP, MAF, p-value, OR, platform, CNV, etc.) | summary of GWAS data (Disease, sample size, gene, SNP, MAF, p-value, OR, platform, CNV, etc.) | summary of T1D related molecular factors (T1D susceptibility regions, Genetic data, Microarray data, functional annotation, Network & Pathway), analysis tools |