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Table 1 Example of the data frame for formal evaluation based on extraction of manual clinical concepts (TN: true negative, TP: true positive, FP: false positive, FN: false negative, Y: yes, N: no)

From: Evaluation of Doc’EDS: a French semantic search tool to query health documents from a clinical data warehouse

Concepts

Negation

Hypothesis

Family Medical history

Well segmented

Left heart failure

TN

TN

FP

Y

Atrial fibrillation

TN

TN

TN

Y

Atrial fibrillation anticoagulant

TN

FN

TN

Y

Known allergy

TP

TN

TN

Y

« Sudden» dyspnea

TN

TN

TN

N

Lung cancer

TN

TN

TP

Y

hematemesis

TN

TP

TN

Y

narcolepsy

TP

TP

TN

Y

asthma

TP

TN

TP

Y

Prealbumin: 0.16

FP

TN

TN

Y