Document-level medical relation extraction via edge-oriented graph neural network based on document structure and external knowledge

Table 4 Effect of different knowledge node representations base on description on the CDR test sets (%)

Method	Overall			Intra	Inter
Method	P	R	F1	F1	F1
SKEoG (TransE)	65.7	75.7	70.4	74.0	60.5
SKEoG (TransE + Doc2vec)	66.2	72.2	69.1	73.7	56.9
SKEoG (TransE + EMB)	65.5	76.6	70.7	74.3	61.3

ISSN: 1472-6947