Table 3 Comparison with three classifier on four datasets in term of ACC, TPR, SPC, PPV, precision, MCC, and AUC
Datasets | Model | ACC (%) | TPR (%) | SPC (%) | PPV (%) | MCC (%) | AUC |
|---|---|---|---|---|---|---|---|
enzymes | MLP | 90.01 | 100 | 80.06 | 83.31 | 81.67 | 0.9967 |
SVM | 89.88 | 92.31 | 87.53 | 88.12 | 81.77 | 0.9686 | |
DeepLSTM | 92.92 | 99.31 | 86.57 | 88.04 | 86.75 | 0.9951 | |
ion channels | MLP | 87.58 | 100 | 75.22 | 80.07 | 77.61 | 0.9972 |
SVM | 89.36 | 85.95 | 92.74 | 92.23 | 80.93 | 0.9613 | |
DeepLSTM | 91.97 | 93.23 | 90.87 | 89.95 | 85.19 | 0.9705 | |
GPCRs | MLP | 87.20 | 76.70 | 97.77 | 97.19 | 77.20 | 0.9853 |
SVM | 85.43 | 86.28 | 84.60 | 84.81 | 74.99 | 0.9230 | |
DeepLSTM | 91.80 | 83.71 | 100 | 100 | 84.44 | 0.9951 | |
nucl. rec | MLP | 88.89 | 88.24 | 89.47 | 88.24 | 80.19 | 0.8421 |
SVM | 85.00 | 68.90 | 100 | 100 | 72.43 | 0.9910 | |
DeepLSTM | 91.11 | 95.24 | 87.50 | 86.96 | 83.76 | 0.9206 |