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Table 4 Performance of multi-omics survival analysis model

From: Deep learning based feature-level integration of multi-omics data for breast cancer patients survival analysis

Integration Data Modality GeneExp
+
DnaMeth
GeneExp
+
miRNA
GeneExp
+
CNVs
DnaMeth
+
miRNA
DnaMeth
+
CNVs
miRNA
+
CNVs
ConcatAE PCA 0.585 ± 0.107 0.59 ± 0.093 0.576 ± 0.047 0.641 ± 0.031 0.583 ± 0.09 0.588 ± 0.057
Variance 0.507 ± 0.036 0.53 ± 0.052 0.524 ± 0.038 0.625 ± 0.023 0.586 ± 0.068 0.603 ± 0.04
CrossAE PCA 0.583 ± 0.07 0.595 ± 0.062 0.553 ± 0.045 0.63 ± 0.081 0.579 ± 0.065 0.578 ± 0.028
Variance 0.511 ± 0.027 0.558 ± 0.054 0.53 ± 0.033 0.605 ± 0.059 0.576 ± 0.026 0.613 ± 0.066
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