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Table 3 Extraction performance for IHC and SP

From: Automated extraction of Biomarker information from pathology reports

A

Recognition

Normalization

 

Recall

Precision

F1

Recall

Precision

F1

TS_ID

1

1

1

BN

0.999

1

0.999

1.000

0.946

0.972

TR

0.998

0.998

0.998

1.000

0.939

0.969

B

Exact Matching

   
 

Recall

Precision

F1

   

Organ

0.896

0.953

0.924

   

Diagnosis

0.794

0.427

0.556

   

C

Overlap matching

   
 

Recall

Precision

F1

   

Organ

0.901

0.961

0.930

   

Diagnosis

0.794

0.754

0.773

   
  1. TS_ID Tissue slide ID, BN Biomarker name, TR Test result