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Table 5 Relation extraction results over Variome corpus relations, with the Characteristics entity type aggregating its subtypes (Concept & Ideas, Disorders, Physiology, and Phenomena) based on 10-fold cross-validation and assuming gold-standard entity annotations

From: Establishing a baseline for literature mining human genetic variants and their relationships to disease cohorts

Relation N P R F
Disease-has-Characteristics 989 0.749 0.602 0.667
Mutation-has-Characteristics 17 0.701 0.583 0.642
Gene-has-Characteristics 230 0.876 0.699 0.778
Cohort-has-Characteristics 239 0.886 0.734 0.803
  1. P = Precision, R = Recall, F = F1 score