Table 5 Recall and precision with different p-value cutoffs in identifying significant SNPS on both datasets, where the mean-squared error (MSE) and maximum error between the exact and the approximate chi-square statistics
From: FORESEE: Fully Outsourced secuRe gEnome Study basEd on homomorphic Encryption
# of SNPs | p-value cutoff | # of significant SNPs | Precision | Recall | MSE (×10−10) | Maximum error (×10−6) |
|---|---|---|---|---|---|---|
311 | 0.05 | 24 | 1 | 1 | 3.21 | 5.5 |
| Â | 0.01 | 20 | 1 | 1 | Â | Â |
| Â | 0.005 | 20 | 1 | 1 | Â | Â |
610 | 0.05 | 56 | 1 | 1 | 4.07 | 6.0 |
| Â | 0.01 | 27 | 1 | 1 | Â | Â |
| Â | 0.005 | 23 | 1 | 1 | Â | Â |