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Table 5 Recall and precision with different p-value cutoffs in identifying significant SNPS on both datasets, where the mean-squared error (MSE) and maximum error between the exact and the approximate chi-square statistics

From: FORESEE: Fully Outsourced secuRe gEnome Study basEd on homomorphic Encryption

# of SNPs p-value cutoff # of significant SNPs Precision Recall MSE (×10−10) Maximum error (×10−6)
311 0.05 24 1 1 3.21 5.5
  0.01 20 1 1   
  0.005 20 1 1   
610 0.05 56 1 1 4.07 6.0
  0.01 27 1 1   
  0.005 23 1 1