Table 5 TF-target functional modules and miRNA-target functional modules from SNP combinations.
Functional Module Name | Category | # of genes | # of genes in functional module | p-value | FDR |
|---|---|---|---|---|---|
TGACAGNY_V$MEIS1_01 | TF-target | 15 | 620 | 1.553E-04 | 1.901E-04 |
V$STAT4_01 | TF-target | 8 | 200 | 2.348E-04 | 2.786E-04 |
YTATTTTNR_V$MEF2_02 | TF-target | 13 | 545 | 5.034E-04 | 6.157E-04 |
V$CDP_02 | TF-target | 5 | 89 | 8.079E-04 | 9.780E-04 |
V$RORA1_01 | TF-target | 7 | 193 | 1.037E-03 | 1.249E-03 |
V$YY1_01 | TF-target | 7 | 195 | 1.101E-03 | 1.262E-03 |
TGCCAAR_V$NF1_Q6 | TF-target | 12 | 545 | 1.658E-03 | 1.731E-03 |
TTGTTT_V$FOXO4_01 | TF-target | 24 | 1549 | 1.435E-03 | 1.873E-03 |
V$OCT1_06 | TF-target | 7 | 218 | 2.086E-03 | 2.121E-03 |
V$NKX25_01 | TF-target | 5 | 102 | 1.491E-03 | 2.128E-03 |
V$CDC5_01 | TF-target | 7 | 217 | 2.032E-03 | 2.720E-03 |
V$AR_Q6 | TF-target | 6 | 178 | 3.419E-03 | 3.618E-03 |
V$POU6F1_01 | TF-target | 6 | 185 | 4.129E-03 | 4.403E-03 |
V$POU3F2_01 | TF-target | 4 | 83 | 4.764E-03 | 5.687E-03 |
V$STAT5A_03 | TF-target | 6 | 198 | 5.732E-03 | 5.794E-03 |
V$STAT6_02 | TF-target | 6 | 192 | 4.944E-03 | 5.855E-03 |
V$EVI1_03 | TF-target | 3 | 44 | 5.546E-03 | 7.165E-03 |
V$PBX1_01 | TF-target | 6 | 194 | 5.197E-03 | 7.461E-03 |
V$SRY_02 | TF-target | 6 | 196 | 5.460E-03 | 7.484E-03 |
V$AFP1_Q6 | TF-target | 6 | 204 | 6.607E-03 | 7.991E-03 |
ACTTTAT,MIR-142-5P | miRNA-target | 7 | 254 | 4.854E-03 | 9.791E-03 |