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Table 5 TF-target functional modules and miRNA-target functional modules from SNP combinations.

From: Finding type 2 diabetes causal single nucleotide polymorphism combinations and functional modules from genome-wide association data

Functional Module Name Category # of genes # of genes in functional module p-value FDR
TGACAGNY_V$MEIS1_01 TF-target 15 620 1.553E-04 1.901E-04
V$STAT4_01 TF-target 8 200 2.348E-04 2.786E-04
YTATTTTNR_V$MEF2_02 TF-target 13 545 5.034E-04 6.157E-04
V$CDP_02 TF-target 5 89 8.079E-04 9.780E-04
V$RORA1_01 TF-target 7 193 1.037E-03 1.249E-03
V$YY1_01 TF-target 7 195 1.101E-03 1.262E-03
TGCCAAR_V$NF1_Q6 TF-target 12 545 1.658E-03 1.731E-03
TTGTTT_V$FOXO4_01 TF-target 24 1549 1.435E-03 1.873E-03
V$OCT1_06 TF-target 7 218 2.086E-03 2.121E-03
V$NKX25_01 TF-target 5 102 1.491E-03 2.128E-03
V$CDC5_01 TF-target 7 217 2.032E-03 2.720E-03
V$AR_Q6 TF-target 6 178 3.419E-03 3.618E-03
V$POU6F1_01 TF-target 6 185 4.129E-03 4.403E-03
V$POU3F2_01 TF-target 4 83 4.764E-03 5.687E-03
V$STAT5A_03 TF-target 6 198 5.732E-03 5.794E-03
V$STAT6_02 TF-target 6 192 4.944E-03 5.855E-03
V$EVI1_03 TF-target 3 44 5.546E-03 7.165E-03
V$PBX1_01 TF-target 6 194 5.197E-03 7.461E-03
V$SRY_02 TF-target 6 196 5.460E-03 7.484E-03
V$AFP1_Q6 TF-target 6 204 6.607E-03 7.991E-03
ACTTTAT,MIR-142-5P miRNA-target 7 254 4.854E-03 9.791E-03