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Table 2 Design of nonmem class in R

From: PKreport: report generation for checking population pharmacokinetic model assumptions

nonmem class slots

nonmem class methods

Storage mode

Description

file.lst

non.lst, non.select

character

Standard output in lst file.

method

non.lst.meth

character

Estimation method extracted from #METH tag in lst file.

analysis

non.lst.term

list

Analysis information extracted between #TERM and #TERE tag in lst file.

objt

non.lst.objt

character

Objective function extracted from #OBJT tag in lst file.

objv

non.lst.objv

character

Objective function value extracted from #OBJV tag in lst file.

objs

non.lst.objs

character

Objective function standard deviation extracted from #OBJS tag in lst file.

tabid

non.tab

character

The title of tab file (the first line of the file) in tab file.

tabdata

non.tab

data frame

Output data starting from the second line in tab file. This is the main data for PKfigure.

file.cov

non.cov

list

Title (character) and data (data.frame) in cov file.

file.cor

non.cor

list

Title (character) and data (data.frame) in cor file.

file.coi

non.coi

list

Title (character) and data (data.frame) in coi file.

file.phi

non.phi

list

Title (character) and data (data.frame) in phi file.

  1. The first column describes the slots in nonmem class, the second column explains the related methods to access the slots, the third column is the storage mode for the slots, and the last column gives the detail of the slot contents.